Papers
Number of the published data : 34

No.1
Publishing type
Authorship Individual works
Title RNAアプタマーの分子認識メカニズムの解明
Author 山岸賢司
Journal 月刊「細胞」
Publisher
Volume/issue/page 692, 45-47
Publication date 2020/04/23
ISSN
DOI
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No.2
Publishing type
Authorship Joint work
Title 計算化学を用いたRNAアプタマーの分子設計手法の確立に向けて
Author 山岸賢司・吉田尚恵
Journal SAR News
Publisher 日本薬学会 構造活性相関部会
Volume/issue/page 38, 9-17
Publication date 2020/04/01
ISSN
DOI
URL
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No.3
Publishing type
Authorship Joint work
Title Binding interaction analysis of RNA aptamer-Fc region of human immunoglobulin G using fragment molecular orbital calculation
Author Hisae Yoshida, Koki Sato, Takeshi Ishikawa, Taiichi Sakamoto, Kenji Yamagishi
Journal Chemical Physics Letters
Publisher ELSEVIER
Volume/issue/page 738, 136854
Publication date 2020/01
ISSN
DOI 10.1016/j.cplett.2019.136854
URL
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No.4
Publishing type Research paper (scientific journal)
Authorship Joint work
Title 分子動力学計算によるRNAアプタマーとヒト抗体の複合体形成におけるCa2+の役割の解析
Author 石井 清一郎, 関口 真裕, 吉田 尚恵, 増川 恵介, 石川 岳志, 坂本 泰一, 山岸 賢司
Journal 日本コンピュータ化学会誌
Publisher
Volume/issue/page 18/ 5, 208-210
Publication date 2019/12
ISSN
DOI 10.2477/jccj.2019-0051
URL
Summary
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No.5
Publishing type
Authorship Joint work(Other)
Title Synthesis and characterization of small interfering RNAs with haloalkyl groups at their 3′-dangling ends
Author Chandela Akash、Watanabe Taeko、Yamagishi Kenji、Ueno Yoshihito
Journal Bioorganic & Medicinal Chemistry
Publisher ELSEVIER
Volume/issue/page 27, 1341-1349
Publication date 2019/04/01
ISSN
DOI 10.1016/j.bmc.2019.02.037
URL
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No.6
Publishing type
Authorship Joint work(Other)
Title Synthesis and Biophysical Characterization of RNAs Containing (R)- and (S)-5′-C-Aminopropyl-2′-O-methyluridines
Author Kajino Ryohei、Maeda Yusuke、Yoshida Hisae、Yamagishi Kenji、Ueno Yoshihito
Journal The Journal of Organic Chemistry
Publisher ACS
Volume/issue/page 84, 3388-3404
Publication date 2019/02
ISSN
DOI 10.1021/acs.joc.8b03277
URL
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No.7
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title Synthesis of 4'-C-aminoalkyl-2'-O-methyl modified RNA and their biological properties
Author Koizumi K, Maeda Y, Kano T, Yoshida H, Sakamoto T, Yamagishi K, Ueno Y.
Journal Bioorg Med Chem.
Publisher ELSEVIER
Volume/issue/page 26/ 12, 3521-3534
Publication date 2018/06
ISSN
DOI 10.1016/j.bmc.2018.05.025
URL
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No.8
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title Selective release of miRNAs via extracellular vesicles is associated with house dust mite allergen-induced airway inflammation
Author Yasuhiro Gon, Shuichiro Maruoka, Toshio Inoue, Kazumichi Kuroda, Kenji Yamagishi, Yutaka Kozu, Sotaro Shikano, Kaori Soda, Jan Lotvall, Shu Hashimoto
Journal Clinical & Experimental Allergy
Publisher
Volume/issue/page 47/ 12, 1586-1598
Publication date 2017/12
ISSN
DOI 10.1111/cea.13016
URL
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No.9
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title Gene expression analysis in airway-secreting extracellular vesicles upon house dust mite exposure
Author Yasuhiro Gon, Shuichiro Maruoka, Kenji Mizumura, Toshio Inoue, Kazumichi Kuroda, Yoshihito Fukano, Kenji Yamagishi, Eriko Tsuboi, Shu Hashimoto
Journal ALLERGOLOGY INTERNATIONAL
Publisher
Volume/issue/page 65, S53-S55
Publication date 2016/09
ISSN
DOI 10.1016/j.alit.2016.04.003
URL
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No.10
Publishing type
Authorship Joint work(Other)
Title Quantitative Determination of Glycine, Alanine, Aspartic Acid, Glutamic Acid, Phenylalanine, and Tryptophan by Raman Spectroscopy.
Author Yasushi Numata, Maria Otsuka, Kenji Yamagishi & Hiroyuki Tanaka
Journal Analytical Letters
Publisher
Volume/issue/page 50/ 4, 651-662
Publication date 2016/05/19
ISSN
DOI 10.1080/00032719.2016.1193189
URL
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No.11
Publishing type Research paper (international conference proceedings)
Authorship Joint work(Other)
Title Exosomal messenger RNAs in the airway are potential biomarkers for acute lung injury in mice
Author Sotaro Shikano, Toshio Inoue, Shuichiro Maruoka, Yasuhiro Gon, Kazumichi Kuroda, Kenji Yamagishi, Kaori Soda, Eriko Tsuboi, Ikuko Takeshita, Shu Hashimoto
Journal European Respipatory Journal
Publisher
Volume/issue/page 2015.PA3873
Publication date 2015/09
ISSN
DOI 10.1183/13993003.congress-2015.PA3873
URL
Summary
Repository

No.12
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title 創薬を視野に入れた呼吸器疾患の病態解明 -細胞外顆粒内RNA情報の臨床応用-
Author 権 寧博, 丸岡 秀一郎, 黒田 和道, 山岸 賢司, 橋本 修
Journal 呼吸と循環
Publisher 医学書院
Volume/issue/page 63/ 6, 541-546
Publication date 2015/06
ISSN
DOI
URL
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No.13
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title Protein stabilization utilizing a redefined codon
Author Kazumasa Ohtake, Atsushi Yamaguchi, Takahito Mukai, Hiroki Kashimura, Nobutaka Hirano, Mitsuru Haruki, Sosuke Kohashi, Kenji Yamagishi, Kazutaka Murayama, Yuri Tomabechi, Takashi Itagaki, Ryogo Akasaka, Masahito Kawazoe, Chie Takemoto,
Mikako Shirouzu, Shigeyuki Yokoyama & Kensaku Sakamoto
Journal Scientific Reports
Publisher nature publishing group
Volume/issue/page 5, 9762
Publication date 2015/05
ISSN
DOI doi:10.1038/srep09762
URL
Summary
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No.14
Publishing type Research paper (scientific journal)
Authorship Joint work
Title RNA-Sequence Analysis by Next-Generation Sequencer for the Early Diagnosis of Respiratory Disease
Author Yoshihito FUKANO, Yuki MIYAZAWA, Taiju MIKOSHI, Toshio INOUE, Shuuichirou MARUOKA, Kazumichi KURODA, Yasuhiro GON, Shu HASHIMOTO, Kenji YAMAGISHI
Journal J. Comput. Chem. Jpn
Publisher
Volume/issue/page 13/ 6, 332
Publication date 2015/01
ISSN
DOI
URL
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No.15
Publishing type Research paper (scientific journal)
Authorship Joint work
Title Analysis of Interactions between Mutant Vitamin D Receptor and Its Ligands: Fragment Molecular Orbital Study
Author Hisae Yoshida, Mitsuru Haruki, Kenji Yamagishi
Journal J. Comput. Chem. Jpn
Publisher
Volume/issue/page 13/ 6, 305-307
Publication date 2014/12
ISSN
DOI
URL
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No.16
Publishing type Research paper (scientific journal)
Authorship Joint work
Title RNA-seqに対するNGSデータ解析プログラムの開発
Author 見越大樹, 深野義人, 宮澤由妃, 山岸賢司
Journal 日本コンピュータ化学会誌
Publisher
Volume/issue/page 13/ 6, 299
Publication date 2014/12
ISSN
DOI
URL
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No.17
Publishing type Research paper (scientific journal)
Authorship Joint work
Title Structural Stability of Halogenated Protein: Fragment Molecular Orbital Study
Author Jumpei Takanohashi, Sousuke Kohashi, Takeshi Ishikawa,
Kensaku Sakamoto, Kenji Yamagishi
Journal J. Comput. Chem. Jpn
Publisher
Volume/issue/page 13/ 6, 308
Publication date 2014/12
ISSN
DOI
URL
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No.18
Publishing type Research paper (scientific journal)
Authorship Joint work
Title Establishment of Next-Generation Sequencer Data Analysis Methods and Exploration of Novel Gene Candidates
Author Yuki Miyazawa, Yoshihito Fukano, Taiju Mikoshi, Toshio Inoue, Syuichirou Maruoka,Kazumichi Kuroda, Gon Yasuhiro, Shu Hashimoto, Kenji Yamagishi
Journal JCCJ
Publisher
Volume/issue/page 13/ 6, 310
Publication date 2014/12/30
ISSN
DOI
URL
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No.19
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title ラット好塩基球様細胞株RBL-2H3の脱顆粒に及ぼすカゼイン由来ペプチドおよび関連アミノ酸の影響
Author 田中守、山岸賢司、菅原卓也、廣内智子、岡本威明
Journal 日本食品科学工学会誌
Publisher
Volume/issue/page 59, 11
Publication date 2012/10
ISSN
DOI
URL
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No.20
Publishing type Research paper (international conference proceedings)
Authorship Joint work(Leading writer)
Title Effect of Electron Density on the Indole Ring of Tryptophan Derivatives on Transcriptional Regulation of Indoleamine 2,3-Dioxygenase (IDO)
Author Kenji Yamagishi, Yu Kuzuoka, Fumiyuki Yamakura, Takeaki Okamoto
Journal ChemMedChem
Publisher
Volume/issue/page 504
Publication date 2012/09
ISSN
DOI
URL
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No.21
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title Differential Expression and Function of Alternative Splicing Variants of Human Liver X Receptor α.
Author Kaori Endo-Umeda, Shigeyuki Uno, Ko Fujimori, Yoshikazu Naito, Koichi Saito, Kenji Yamagishi, Yangsik Jeong, Hiroyuki Miyachi, Hiroaki Tokiwa, Sachiko Yamada, Makoto Makishima
Journal Mol Pharmacol
Publisher
Volume/issue/page 81/ 6, 800-810
Publication date 2012/04
ISSN
DOI
URL
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No.22
Publishing type Research paper (research society, symposium materials, etc.)
Authorship Joint work(Other)
Title リガンドを介した1α,25(OH)2D3/VDRのアロステリックコミュニケーション
Author 元吉沙也加、山岸賢司、槇島誠、山田幸子、常盤広明
Journal ビタミン
Publisher
Volume/issue/page 84/ 4, 175
Publication date 2010/11
ISSN
DOI
URL
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No.23
Publishing type Research paper (scientific journal)
Authorship Joint work(Leading writer)
Title Flexible ligand recognition of peroxisome proliferator-activatedd receptor-γ (PPARγ)
Author Kenji Yamagishi, Keiko Yamamoto, Yuji Mochizuki, Tatsuya Nakano, Sachiko Yamada, Hiroaki Tokiwa
Journal Bioorganic & Medicinal Chemistry Letters
Publisher
Volume/issue/page 20, 3344-3347
Publication date 2010/08
ISSN
DOI
URL
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No.24
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title Ligand-Dependent Conformational Change Reflects Steric Structure and Interactions of a vitamin D receptor/Ligand Complex: A Fragment Molecular Orbital Study
Author Sayaka Motoyoshi, Kenji Yamagishi, Sachiko Yamada, Hiroaki Tokiwa
Journal Journal of Steroid Biochemistry and Molecular Biology
Publisher
Volume/issue/page 121, 56-59
Publication date 2010/06
ISSN
DOI
URL
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No.25
Publishing type Research paper (scientific journal)
Authorship Joint work(Leading writer)
Title Interactions Between 1α,25(OH)2D3 and Residues in the Ligand-Binding Pocket of the Vitamin D Receptor: A Correlated Fragment Molecular Orbital Study
Author Kenji Yamagishi, Hiroaki Tokiwa, Makoto Makishima, Sachiko Yamada
Journal Journal of Steroid Biochemistry and Molecular Biology
Publisher
Volume/issue/page 121, 63-67
Publication date 2010/06
ISSN
DOI
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No.26
Publishing type Research paper (research society, symposium materials, etc.)
Authorship Joint work(Other)
Title トリプトファン誘導体の indoleamine2,3-dioxygenase (IDO)転写調節機能
Author 岡本威明、山岸賢司、叶内宏明、常盤広明、日高和夫
Journal 生物機能研究会誌13
Publisher
Volume/issue/page 52-56
Publication date 2010/03
ISSN
DOI
URL
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No.27
Publishing type Research paper (bulletin of university, research institution)
Authorship Joint work(Other)
Title Effect of electron density on the indole ring of tryptophan derivatives on transcriptional regulation of indoleamine 2,3-dioxygenase (IDO)
Author Takeaki Okamoto, Kenji Yamagishi, Kotomi Aso, Fumiyuki Yamakura, Hiroaki Tokiwa, Shigenobu Tone, Kazuo Hidaka
Journal Kawasaki Ikaishi Arts & Sci
Publisher
Volume/issue/page 35, 1-9
Publication date 2009/02
ISSN
DOI
URL
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No.28
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title Ab initio fragment molecular orbital study of ligand binding to human progesterone receptor ligand-binding domain
Author Takanori Harada, Kenji Yamagishi, Tatsuya Nakano, Kazuo Kitaura, Hiroaki Tokiwa
Journal Naunyn-Schmiedeberg’s Archives of Pharmacology
Publisher
Volume/issue/page 377, 607-615
Publication date 2008/09
ISSN
DOI
URL
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No.29
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title QSAR Study of Cyclic Urea Type HIV-1 PR Inhibitors Using Ab Initio MO Calculation of Their Complex Structure with HIV-I PR
Author Tatsusada Yoshida, Kenji Yamagishi, Hiroshi Chuman
Journal QSAR & Combinatorial Science
Publisher
Volume/issue/page 27/ 6, 694-703
Publication date 2008/08
ISSN
DOI
URL
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No.30
Publishing type (MISC) Summary of the papers read (national conference and other science council)
Authorship Joint work(Other)
Title Development and its Application of in silico Drug Design Based on Ab initio Docking Method
Author Sayaka Motoyoshi, Kenji Yamagishi, Sachiko Yamada, Hiroaki Tokiwa
Journal YAKUGAKU ZASSHI
Publisher
Volume/issue/page 128/ 3, 207-208
Publication date 2008/08
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DOI
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No.31
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title Frontier Simulation Software for Industrial Science
Author Chisachi Kato, Makoto Tsubokura, Yuji Mochizuki, Katsumi Yamashita, Tadashi Murase, Kenji Yamagishi, Hiroaki Tokiwa, Tatsuya Nakano, Takenori Yamamoto, Takashisa Ohno
Journal Annual Report of the Earth Simulator Center
Publisher
Volume/issue/page 299-304
Publication date 2007/04
ISSN 1348-5922
DOI
URL
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No.32
Publishing type Research paper (scientific journal)
Authorship Joint work(Other)
Title Vitamin D Receptor: Ligand Recognition and Allosteric Network
Author Keiko Yamamoto, Daijiro Abe, Nobuko Yoshimoto, Mihwa Choi, Kenji Yamagishi, Hiroaki Tokiwa, Masato Shimizu, Makoto Makishima, Sachiko Yamada
Journal Journal of Medicinal Chemistry
Publisher
Volume/issue/page 46, 1313-1324
Publication date 2006/08
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DOI
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No.33
Publishing type Research paper (scientific journal)
Authorship Joint work(Leading writer)
Title Functions of key residues in the ligand-binding pocket of vitamin D receptor: Fragment molecular orbital-interfragment interaction energy analysis
Author Kenji Yamagishi, Keiko Yamamoto, Sachiko Yamada, Hiroaki Tokiwa
Journal Chemical Physics Letters
Publisher
Volume/issue/page 420, 465-468
Publication date 2006/03
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DOI
URL
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No.34
Publishing type (MISC) Summary of the papers read (national conference and other science council)
Authorship Joint work(Other)
Title Quantitative Structure-Activity Relationship Analysis for HIV-1 PR Inhibitors including Dynamical Conformation Change
Author Misato Kawawada, Kenji Yamagishi, Hiroyuki Teramae, Hiroshi Chuman, Hiroaki Tokiwa
Journal YAKUGAKU ZASSHI
Publisher
Volume/issue/page 124/ 3, 227-228
Publication date 2004/11
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